Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a20aQ8VDB9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Slc6a20aQ8VDB9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a20aQ8VDB9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a20aQ8VDB9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a20aQ8VDB9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.35■□□□□ 0.69
Slc6a20aQ8VDB9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a20aQ8VDB9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a20aQ8VDB9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a20aQ8VDB9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a20aQ8VDB9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Slc6a20aQ8VDB9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a20aQ8VDB9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20aQ8VDB9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20aQ8VDB9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20aQ8VDB9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20aQ8VDB9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20aQ8VDB9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20aQ8VDB9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20aQ8VDB9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.31■□□□□ 0.68
Slc6a20aQ8VDB9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.31■□□□□ 0.68
Slc6a20aQ8VDB9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20aQ8VDB9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20aQ8VDB9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.31■□□□□ 0.68
Slc6a20aQ8VDB9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20aQ8VDB9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20aQ8VDB9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20aQ8VDB9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms