Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb7Q8CDY9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb7Q8CDY9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.64■□□□□ 0.74
Pcdhb7Q8CDY9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb7Q8CDY9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Pcdhb7Q8CDY9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb7Q8CDY9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb7Q8CDY9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb7Q8CDY9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb7Q8CDY9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhb7Q8CDY9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb7Q8CDY9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb7Q8CDY9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb7Q8CDY9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb7Q8CDY9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.58■□□□□ 0.73
Pcdhb7Q8CDY9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.58■□□□□ 0.73
Pcdhb7Q8CDY9 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb7Q8CDY9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb7Q8CDY9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb7Q8CDY9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms