Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Ccdc60Q8C4J0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Gm34220-201ENSMUST00000223001 2709 ntBASIC25.13■■□□□ 1.61
Ccdc60Q8C4J0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc60Q8C4J0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 Gm43017-201ENSMUST00000198296 752 ntBASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc60Q8C4J0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Ccdc60Q8C4J0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ccdc60Q8C4J0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC25.08■■□□□ 1.61
Ccdc60Q8C4J0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Ccdc60Q8C4J0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ccdc60Q8C4J0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ccdc60Q8C4J0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ccdc60Q8C4J0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC25.06■■□□□ 1.6
Ccdc60Q8C4J0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC25.06■■□□□ 1.6
Ccdc60Q8C4J0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
Ccdc60Q8C4J0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ccdc60Q8C4J0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 AA386476-201ENSMUST00000098781 1665 ntBASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 Smad6-203ENSMUST00000179458 273 ntBASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ccdc60Q8C4J0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc60Q8C4J0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ccdc60Q8C4J0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ccdc60Q8C4J0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC25.03■■□□□ 1.6
Ccdc60Q8C4J0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ccdc60Q8C4J0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc60Q8C4J0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc60Q8C4J0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc60Q8C4J0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
Ccdc60Q8C4J0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc60Q8C4J0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc60Q8C4J0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Ccdc60Q8C4J0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms