Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.7■□□□□ 0.1
Chd9Q8BYH8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd9Q8BYH8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chd9Q8BYH8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.7■□□□□ 0.1
Chd9Q8BYH8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd9Q8BYH8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd9Q8BYH8 Gm7290-201ENSMUST00000104990 617 ntBASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Gm12918-201ENSMUST00000120234 636 ntBASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Gm15710-201ENSMUST00000121821 636 ntBASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Gm6211-202ENSMUST00000167849 925 ntBASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Gm5075-201ENSMUST00000196916 622 ntBASIC15.69■□□□□ 0.1
Chd9Q8BYH8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd9Q8BYH8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd9Q8BYH8 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.68■□□□□ 0.1
Chd9Q8BYH8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Chd9Q8BYH8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd9Q8BYH8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd9Q8BYH8 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.68■□□□□ 0.1
Chd9Q8BYH8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Chd9Q8BYH8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd9Q8BYH8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Gm6420-201ENSMUST00000193885 723 ntBASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Gm11249-201ENSMUST00000117071 859 ntBASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Gm6433-201ENSMUST00000118634 875 ntBASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd9Q8BYH8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Gm10231-201ENSMUST00000181584 441 ntBASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Gm10175-202ENSMUST00000208752 441 ntBASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Gm5643-201ENSMUST00000117081 966 ntBASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chd9Q8BYH8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Gm43799-201ENSMUST00000201845 579 ntBASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chd9Q8BYH8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms