Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.72■■□□□ 1.23
VmacQ8BP01 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
VmacQ8BP01 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
VmacQ8BP01 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
VmacQ8BP01 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
VmacQ8BP01 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VmacQ8BP01 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
VmacQ8BP01 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VmacQ8BP01 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VmacQ8BP01 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VmacQ8BP01 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
VmacQ8BP01 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
VmacQ8BP01 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
VmacQ8BP01 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.7■■□□□ 1.22
VmacQ8BP01 Smad6-203ENSMUST00000179458 273 ntBASIC22.7■■□□□ 1.22
VmacQ8BP01 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
VmacQ8BP01 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.7■■□□□ 1.22
VmacQ8BP01 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
VmacQ8BP01 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.7■■□□□ 1.22
VmacQ8BP01 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
VmacQ8BP01 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
VmacQ8BP01 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.69■■□□□ 1.22
VmacQ8BP01 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
VmacQ8BP01 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
VmacQ8BP01 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
VmacQ8BP01 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.69■■□□□ 1.22
VmacQ8BP01 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
VmacQ8BP01 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
VmacQ8BP01 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
VmacQ8BP01 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VmacQ8BP01 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VmacQ8BP01 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VmacQ8BP01 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
VmacQ8BP01 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
VmacQ8BP01 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VmacQ8BP01 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VmacQ8BP01 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.66■■□□□ 1.22
VmacQ8BP01 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
VmacQ8BP01 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
VmacQ8BP01 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VmacQ8BP01 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
VmacQ8BP01 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VmacQ8BP01 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VmacQ8BP01 Gm10571-201ENSMUST00000097869 1638 ntBASIC22.65■■□□□ 1.22
VmacQ8BP01 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
VmacQ8BP01 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VmacQ8BP01 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
VmacQ8BP01 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
VmacQ8BP01 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
VmacQ8BP01 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.64■■□□□ 1.22
VmacQ8BP01 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VmacQ8BP01 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VmacQ8BP01 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VmacQ8BP01 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VmacQ8BP01 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
VmacQ8BP01 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VmacQ8BP01 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VmacQ8BP01 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
VmacQ8BP01 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VmacQ8BP01 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
VmacQ8BP01 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VmacQ8BP01 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VmacQ8BP01 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VmacQ8BP01 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VmacQ8BP01 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VmacQ8BP01 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
VmacQ8BP01 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VmacQ8BP01 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VmacQ8BP01 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
VmacQ8BP01 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.62■■□□□ 1.21
VmacQ8BP01 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
VmacQ8BP01 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
VmacQ8BP01 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VmacQ8BP01 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
VmacQ8BP01 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
VmacQ8BP01 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
VmacQ8BP01 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.61■■□□□ 1.21
VmacQ8BP01 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
VmacQ8BP01 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VmacQ8BP01 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
VmacQ8BP01 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VmacQ8BP01 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VmacQ8BP01 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VmacQ8BP01 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VmacQ8BP01 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VmacQ8BP01 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
VmacQ8BP01 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
VmacQ8BP01 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.6■■□□□ 1.21
VmacQ8BP01 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
VmacQ8BP01 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.6■■□□□ 1.21
VmacQ8BP01 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.6■■□□□ 1.21
VmacQ8BP01 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
VmacQ8BP01 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms