Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne4Q8BLR2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne4Q8BLR2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpne4Q8BLR2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.56■□□□□ 0.4
Cpne4Q8BLR2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cpne4Q8BLR2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cpne4Q8BLR2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cpne4Q8BLR2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cpne4Q8BLR2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpne4Q8BLR2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.53■□□□□ 0.4
Cpne4Q8BLR2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Smad6-203ENSMUST00000179458 273 ntBASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Gm26833-201ENSMUST00000180899 440 ntBASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpne4Q8BLR2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Cpne4Q8BLR2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Cpne4Q8BLR2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cpne4Q8BLR2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cpne4Q8BLR2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpne4Q8BLR2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms