Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trnp1Q80ZI1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trnp1Q80ZI1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.46■■□□□ 1.19
Trnp1Q80ZI1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.46■■□□□ 1.19
Trnp1Q80ZI1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Trnp1Q80ZI1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.46■■□□□ 1.19
Trnp1Q80ZI1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Trnp1Q80ZI1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnp1Q80ZI1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trnp1Q80ZI1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnp1Q80ZI1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnp1Q80ZI1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trnp1Q80ZI1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnp1Q80ZI1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnp1Q80ZI1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Trnp1Q80ZI1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trnp1Q80ZI1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Trmt13-210ENSMUST00000198454 880 ntBASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnp1Q80ZI1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trnp1Q80ZI1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trnp1Q80ZI1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trnp1Q80ZI1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trnp1Q80ZI1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trnp1Q80ZI1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trnp1Q80ZI1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trnp1Q80ZI1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trnp1Q80ZI1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trnp1Q80ZI1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trnp1Q80ZI1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trnp1Q80ZI1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Trnp1Q80ZI1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trnp1Q80ZI1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trnp1Q80ZI1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trnp1Q80ZI1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnp1Q80ZI1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Mir6982-201ENSMUST00000184354 68 ntBASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trnp1Q80ZI1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trnp1Q80ZI1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trnp1Q80ZI1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trnp1Q80ZI1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Trnp1Q80ZI1 Gm7977-201ENSMUST00000193787 748 ntBASIC22.36■■□□□ 1.17
Trnp1Q80ZI1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trnp1Q80ZI1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Trnp1Q80ZI1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trnp1Q80ZI1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trnp1Q80ZI1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.35■■□□□ 1.17
Trnp1Q80ZI1 Gm26524-201ENSMUST00000192339 390 ntBASIC22.35■■□□□ 1.17
Trnp1Q80ZI1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Trnp1Q80ZI1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trnp1Q80ZI1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.34■■□□□ 1.17
Trnp1Q80ZI1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
Trnp1Q80ZI1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trnp1Q80ZI1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trnp1Q80ZI1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Trnp1Q80ZI1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms