Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf139Q7TMV1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf139Q7TMV1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf139Q7TMV1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf139Q7TMV1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf139Q7TMV1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf139Q7TMV1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf139Q7TMV1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.08■□□□□ 0.97
Rnf139Q7TMV1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.08■□□□□ 0.97
Rnf139Q7TMV1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Rnf139Q7TMV1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf139Q7TMV1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf139Q7TMV1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf139Q7TMV1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rnf139Q7TMV1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf139Q7TMV1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf139Q7TMV1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf139Q7TMV1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf139Q7TMV1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 AA386476-201ENSMUST00000098781 1665 ntBASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf139Q7TMV1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.04■□□□□ 0.96
Rnf139Q7TMV1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf139Q7TMV1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf139Q7TMV1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf139Q7TMV1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf139Q7TMV1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rnf139Q7TMV1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf139Q7TMV1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.02■□□□□ 0.96
Rnf139Q7TMV1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf139Q7TMV1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.02■□□□□ 0.96
Rnf139Q7TMV1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf139Q7TMV1 Gm43017-201ENSMUST00000198296 752 ntBASIC21.02■□□□□ 0.96
Rnf139Q7TMV1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf139Q7TMV1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf139Q7TMV1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rnf139Q7TMV1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf139Q7TMV1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf139Q7TMV1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf139Q7TMV1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Rnf139Q7TMV1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf139Q7TMV1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf139Q7TMV1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Rnf139Q7TMV1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rnf139Q7TMV1 Smad6-203ENSMUST00000179458 273 ntBASIC21■□□□□ 0.95
Rnf139Q7TMV1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21■□□□□ 0.95
Rnf139Q7TMV1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf139Q7TMV1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rnf139Q7TMV1 Serp2-204ENSMUST00000228055 705 ntBASIC21■□□□□ 0.95
Rnf139Q7TMV1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Rnf139Q7TMV1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rnf139Q7TMV1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf139Q7TMV1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rnf139Q7TMV1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf139Q7TMV1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.99■□□□□ 0.95
Rnf139Q7TMV1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf139Q7TMV1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf139Q7TMV1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf139Q7TMV1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rnf139Q7TMV1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf139Q7TMV1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf139Q7TMV1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.98■□□□□ 0.95
Rnf139Q7TMV1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rnf139Q7TMV1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf139Q7TMV1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf139Q7TMV1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf139Q7TMV1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms