Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx55Q6ZPL9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Gm13534-201ENSMUST00000121169 513 ntBASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.58■■□□□ 1.21
Ddx55Q6ZPL9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ddx55Q6ZPL9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.58■■□□□ 1.2
Ddx55Q6ZPL9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx55Q6ZPL9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Gm20049-201ENSMUST00000219950 730 ntBASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx55Q6ZPL9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.55■■□□□ 1.2
Ddx55Q6ZPL9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx55Q6ZPL9 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.54■■□□□ 1.2
Ddx55Q6ZPL9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ddx55Q6ZPL9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx55Q6ZPL9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.2
Ddx55Q6ZPL9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Ddx55Q6ZPL9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx55Q6ZPL9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Gm6211-202ENSMUST00000167849 925 ntBASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx55Q6ZPL9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx55Q6ZPL9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.52■■□□□ 1.2
Ddx55Q6ZPL9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
Ddx55Q6ZPL9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx55Q6ZPL9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx55Q6ZPL9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ddx55Q6ZPL9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx55Q6ZPL9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx55Q6ZPL9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 Gm13168-201ENSMUST00000121771 632 ntBASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx55Q6ZPL9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx55Q6ZPL9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx55Q6ZPL9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx55Q6ZPL9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx55Q6ZPL9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx55Q6ZPL9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.49■■□□□ 1.19
Ddx55Q6ZPL9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx55Q6ZPL9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms