Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.06■□□□□ 0.96
BLOC1S3Q6QNY0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 TSPY13P-201ENST00000338964 914 ntBASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BLOC1S3Q6QNY0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BLOC1S3Q6QNY0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
BLOC1S3Q6QNY0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 AC026310.3-201ENST00000625186 2373 ntBASIC21.02■□□□□ 0.96
BLOC1S3Q6QNY0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.02■□□□□ 0.95
BLOC1S3Q6QNY0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
BLOC1S3Q6QNY0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 LINC01960-201ENST00000563759 1884 ntBASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
BLOC1S3Q6QNY0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 AC010542.4-201ENST00000563151 1910 ntBASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 AC103834.1-201ENST00000520383 144 ntBASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 AC137630.3-201ENST00000607245 391 ntBASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BLOC1S3Q6QNY0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 AL024507.2-201ENST00000606070 2574 ntBASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 AC005703.6-201ENST00000623265 1329 ntBASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BLOC1S3Q6QNY0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S3Q6QNY0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S3Q6QNY0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S3Q6QNY0 FAM99A-202ENST00000538190 1989 ntBASIC20.98■□□□□ 0.95
BLOC1S3Q6QNY0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.98■□□□□ 0.95
BLOC1S3Q6QNY0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BLOC1S3Q6QNY0 MIR6722-201ENST00000617286 78 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms