Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Slx4Q6P1D7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Slx4Q6P1D7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Slx4Q6P1D7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC30.87■■■□□ 2.53
Slx4Q6P1D7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
Slx4Q6P1D7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Slx4Q6P1D7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC30.86■■■□□ 2.53
Slx4Q6P1D7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Slx4Q6P1D7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Slx4Q6P1D7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Slx4Q6P1D7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Slx4Q6P1D7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC30.85■■■□□ 2.53
Slx4Q6P1D7 Gm38205-201ENSMUST00000192243 258 ntBASIC30.85■■■□□ 2.53
Slx4Q6P1D7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC30.84■■■□□ 2.53
Slx4Q6P1D7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Slx4Q6P1D7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Slx4Q6P1D7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC30.84■■■□□ 2.53
Slx4Q6P1D7 AC158538.1-201ENSMUST00000225870 294 ntBASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Slx4Q6P1D7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
Slx4Q6P1D7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Slx4Q6P1D7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Slx4Q6P1D7 Gm13534-201ENSMUST00000121169 513 ntBASIC30.82■■■□□ 2.52
Slx4Q6P1D7 Gm29241-201ENSMUST00000189260 1096 ntBASIC30.82■■■□□ 2.52
Slx4Q6P1D7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Slx4Q6P1D7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Slx4Q6P1D7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Slx4Q6P1D7 Gm6420-201ENSMUST00000193885 723 ntBASIC30.81■■■□□ 2.52
Slx4Q6P1D7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Slx4Q6P1D7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Slx4Q6P1D7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Dmtn-209ENSMUST00000228295 2572 ntBASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Gm10812-201ENSMUST00000099864 546 ntBASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Slx4Q6P1D7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Gm44878-201ENSMUST00000205812 1295 ntBASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Gm6365-201ENSMUST00000054711 744 ntBASIC30.79■■■□□ 2.52
Slx4Q6P1D7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Slx4Q6P1D7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Slx4Q6P1D7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Slx4Q6P1D7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Slx4Q6P1D7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Slx4Q6P1D7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Slx4Q6P1D7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC30.78■■■□□ 2.52
Slx4Q6P1D7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Slx4Q6P1D7 Gm13181-201ENSMUST00000120117 1069 ntBASIC30.76■■■□□ 2.52
Slx4Q6P1D7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC30.76■■■□□ 2.52
Slx4Q6P1D7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Slx4Q6P1D7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC30.75■■■□□ 2.51
Slx4Q6P1D7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Slx4Q6P1D7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC30.75■■■□□ 2.51
Slx4Q6P1D7 Trmt13-210ENSMUST00000198454 880 ntBASIC30.75■■■□□ 2.51
Slx4Q6P1D7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Slx4Q6P1D7 Gm7977-201ENSMUST00000193787 748 ntBASIC30.75■■■□□ 2.51
Slx4Q6P1D7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Slx4Q6P1D7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Slx4Q6P1D7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Slx4Q6P1D7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Slx4Q6P1D7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Slx4Q6P1D7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Slx4Q6P1D7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Slx4Q6P1D7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Slx4Q6P1D7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Slx4Q6P1D7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Slx4Q6P1D7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
Slx4Q6P1D7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC30.73■■■□□ 2.51
Slx4Q6P1D7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Slx4Q6P1D7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Slx4Q6P1D7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Slx4Q6P1D7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Slx4Q6P1D7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Slx4Q6P1D7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms