Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sp140Q6NSQ5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.93■□□□□ 0.78
Sp140Q6NSQ5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sp140Q6NSQ5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sp140Q6NSQ5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sp140Q6NSQ5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sp140Q6NSQ5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sp140Q6NSQ5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sp140Q6NSQ5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sp140Q6NSQ5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sp140Q6NSQ5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.91■□□□□ 0.78
Sp140Q6NSQ5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sp140Q6NSQ5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sp140Q6NSQ5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Sp140Q6NSQ5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sp140Q6NSQ5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sp140Q6NSQ5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.88■□□□□ 0.77
Sp140Q6NSQ5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sp140Q6NSQ5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sp140Q6NSQ5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sp140Q6NSQ5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sp140Q6NSQ5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Sp140Q6NSQ5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sp140Q6NSQ5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.86■□□□□ 0.77
Sp140Q6NSQ5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Sp140Q6NSQ5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sp140Q6NSQ5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sp140Q6NSQ5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Gm9847-201ENSMUST00000052528 599 ntBASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sp140Q6NSQ5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp140Q6NSQ5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp140Q6NSQ5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sp140Q6NSQ5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.84■□□□□ 0.77
Sp140Q6NSQ5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp140Q6NSQ5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sp140Q6NSQ5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp140Q6NSQ5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp140Q6NSQ5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sp140Q6NSQ5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp140Q6NSQ5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp140Q6NSQ5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.83■□□□□ 0.77
Sp140Q6NSQ5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sp140Q6NSQ5 AA386476-201ENSMUST00000098781 1665 ntBASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms