Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Krt42Q6IFX2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Krt42Q6IFX2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Krt42Q6IFX2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.15■□□□□ 0.82
Krt42Q6IFX2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Krt42Q6IFX2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Krt42Q6IFX2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.14■□□□□ 0.82
Krt42Q6IFX2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Krt42Q6IFX2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Krt42Q6IFX2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Krt42Q6IFX2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Krt42Q6IFX2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Krt42Q6IFX2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Krt42Q6IFX2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Krt42Q6IFX2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Krt42Q6IFX2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Krt42Q6IFX2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Krt42Q6IFX2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Krt42Q6IFX2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Krt42Q6IFX2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Krt42Q6IFX2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Krt42Q6IFX2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.12■□□□□ 0.81
Krt42Q6IFX2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Grk6-206ENSMUST00000224995 2971 ntBASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.11■□□□□ 0.81
Krt42Q6IFX2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Krt42Q6IFX2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.09■□□□□ 0.81
Krt42Q6IFX2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Krt42Q6IFX2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt42Q6IFX2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Krt42Q6IFX2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Krt42Q6IFX2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Krt42Q6IFX2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt42Q6IFX2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt42Q6IFX2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms