Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VclQ64727 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VclQ64727 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.28■□□□□ 0.68
VclQ64727 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VclQ64727 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VclQ64727 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VclQ64727 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
VclQ64727 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.27■□□□□ 0.68
VclQ64727 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VclQ64727 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VclQ64727 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VclQ64727 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.27■□□□□ 0.68
VclQ64727 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VclQ64727 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VclQ64727 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VclQ64727 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VclQ64727 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VclQ64727 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VclQ64727 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
VclQ64727 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.26■□□□□ 0.67
VclQ64727 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VclQ64727 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VclQ64727 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VclQ64727 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VclQ64727 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VclQ64727 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VclQ64727 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
VclQ64727 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
VclQ64727 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.25■□□□□ 0.67
VclQ64727 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.25■□□□□ 0.67
VclQ64727 Smad6-203ENSMUST00000179458 273 ntBASIC19.25■□□□□ 0.67
VclQ64727 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VclQ64727 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.25■□□□□ 0.67
VclQ64727 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VclQ64727 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VclQ64727 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VclQ64727 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VclQ64727 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.24■□□□□ 0.67
VclQ64727 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.24■□□□□ 0.67
VclQ64727 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VclQ64727 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VclQ64727 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.24■□□□□ 0.67
VclQ64727 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VclQ64727 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VclQ64727 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.24■□□□□ 0.67
VclQ64727 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VclQ64727 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VclQ64727 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VclQ64727 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.23■□□□□ 0.67
VclQ64727 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.23■□□□□ 0.67
VclQ64727 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VclQ64727 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VclQ64727 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VclQ64727 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VclQ64727 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.22■□□□□ 0.67
VclQ64727 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VclQ64727 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.22■□□□□ 0.67
VclQ64727 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.22■□□□□ 0.67
VclQ64727 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
VclQ64727 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VclQ64727 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VclQ64727 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VclQ64727 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VclQ64727 Gm11421-201ENSMUST00000122124 294 ntBASIC19.21■□□□□ 0.67
VclQ64727 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.21■□□□□ 0.67
VclQ64727 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.21■□□□□ 0.67
VclQ64727 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
VclQ64727 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
VclQ64727 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VclQ64727 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VclQ64727 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
VclQ64727 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.2■□□□□ 0.66
VclQ64727 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VclQ64727 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms