Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Gm18284-201ENSMUST00000172604 624 ntBASIC20.54■□□□□ 0.88
Smarcd1Q61466 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smarcd1Q61466 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.53■□□□□ 0.88
Smarcd1Q61466 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd1Q61466 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Smarcd1Q61466 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smarcd1Q61466 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.52■□□□□ 0.88
Smarcd1Q61466 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd1Q61466 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd1Q61466 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smarcd1Q61466 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcd1Q61466 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd1Q61466 AA386476-201ENSMUST00000098781 1665 ntBASIC20.51■□□□□ 0.87
Smarcd1Q61466 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd1Q61466 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd1Q61466 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd1Q61466 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd1Q61466 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.49■□□□□ 0.87
Smarcd1Q61466 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd1Q61466 Gm8495-201ENSMUST00000188740 694 ntBASIC20.49■□□□□ 0.87
Smarcd1Q61466 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.49■□□□□ 0.87
Smarcd1Q61466 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.49■□□□□ 0.87
Smarcd1Q61466 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.49■□□□□ 0.87
Smarcd1Q61466 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd1Q61466 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd1Q61466 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd1Q61466 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd1Q61466 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Smarcd1Q61466 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Smarcd1Q61466 Gm27801-201ENSMUST00000184174 223 ntBASIC20.47■□□□□ 0.87
Smarcd1Q61466 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd1Q61466 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd1Q61466 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd1Q61466 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd1Q61466 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd1Q61466 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.46■□□□□ 0.87
Smarcd1Q61466 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.46■□□□□ 0.87
Smarcd1Q61466 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.46■□□□□ 0.87
Smarcd1Q61466 Gm5874-201ENSMUST00000096101 508 ntBASIC20.46■□□□□ 0.87
Smarcd1Q61466 Gm10493-201ENSMUST00000097270 612 ntBASIC20.46■□□□□ 0.87
Smarcd1Q61466 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd1Q61466 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd1Q61466 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Smarcd1Q61466 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Smarcd1Q61466 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.45■□□□□ 0.86
Smarcd1Q61466 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd1Q61466 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd1Q61466 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smarcd1Q61466 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms