Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NfkbibQ60778 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.78■■□□□ 1.4
NfkbibQ60778 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.78■■□□□ 1.4
NfkbibQ60778 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NfkbibQ60778 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.78■■□□□ 1.4
NfkbibQ60778 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NfkbibQ60778 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NfkbibQ60778 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
NfkbibQ60778 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NfkbibQ60778 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NfkbibQ60778 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NfkbibQ60778 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
NfkbibQ60778 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.39
NfkbibQ60778 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NfkbibQ60778 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.76■■□□□ 1.39
NfkbibQ60778 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
NfkbibQ60778 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NfkbibQ60778 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NfkbibQ60778 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NfkbibQ60778 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.75■■□□□ 1.39
NfkbibQ60778 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.75■■□□□ 1.39
NfkbibQ60778 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.75■■□□□ 1.39
NfkbibQ60778 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NfkbibQ60778 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NfkbibQ60778 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NfkbibQ60778 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.75■■□□□ 1.39
NfkbibQ60778 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NfkbibQ60778 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.74■■□□□ 1.39
NfkbibQ60778 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NfkbibQ60778 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NfkbibQ60778 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NfkbibQ60778 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NfkbibQ60778 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NfkbibQ60778 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NfkbibQ60778 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NfkbibQ60778 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NfkbibQ60778 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
NfkbibQ60778 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NfkbibQ60778 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
NfkbibQ60778 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.73■■□□□ 1.39
NfkbibQ60778 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NfkbibQ60778 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NfkbibQ60778 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.72■■□□□ 1.39
NfkbibQ60778 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NfkbibQ60778 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NfkbibQ60778 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NfkbibQ60778 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NfkbibQ60778 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NfkbibQ60778 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.71■■□□□ 1.39
NfkbibQ60778 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.71■■□□□ 1.39
NfkbibQ60778 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.71■■□□□ 1.39
NfkbibQ60778 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
NfkbibQ60778 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
NfkbibQ60778 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
NfkbibQ60778 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NfkbibQ60778 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
NfkbibQ60778 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
NfkbibQ60778 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NfkbibQ60778 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
NfkbibQ60778 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NfkbibQ60778 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NfkbibQ60778 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.69■■□□□ 1.38
NfkbibQ60778 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NfkbibQ60778 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
NfkbibQ60778 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NfkbibQ60778 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NfkbibQ60778 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NfkbibQ60778 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.68■■□□□ 1.38
NfkbibQ60778 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NfkbibQ60778 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.68■■□□□ 1.38
NfkbibQ60778 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
NfkbibQ60778 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
NfkbibQ60778 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.67■■□□□ 1.38
NfkbibQ60778 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.67■■□□□ 1.38
NfkbibQ60778 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NfkbibQ60778 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.67■■□□□ 1.38
NfkbibQ60778 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NfkbibQ60778 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NfkbibQ60778 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
NfkbibQ60778 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
NfkbibQ60778 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
NfkbibQ60778 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NfkbibQ60778 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms