Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Gm27801-201ENSMUST00000184174 223 ntBASIC20.39■□□□□ 0.85
Cldn11Q60771 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.39■□□□□ 0.85
Cldn11Q60771 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn11Q60771 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn11Q60771 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn11Q60771 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cldn11Q60771 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cldn11Q60771 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.38■□□□□ 0.85
Cldn11Q60771 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.38■□□□□ 0.85
Cldn11Q60771 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn11Q60771 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn11Q60771 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn11Q60771 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn11Q60771 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn11Q60771 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn11Q60771 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn11Q60771 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn11Q60771 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.37■□□□□ 0.85
Cldn11Q60771 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.36■□□□□ 0.85
Cldn11Q60771 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cldn11Q60771 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.36■□□□□ 0.85
Cldn11Q60771 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
Cldn11Q60771 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.36■□□□□ 0.85
Cldn11Q60771 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.36■□□□□ 0.85
Cldn11Q60771 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.36■□□□□ 0.85
Cldn11Q60771 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.36■□□□□ 0.85
Cldn11Q60771 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.36■□□□□ 0.85
Cldn11Q60771 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn11Q60771 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cldn11Q60771 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cldn11Q60771 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn11Q60771 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cldn11Q60771 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
Cldn11Q60771 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn11Q60771 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.35■□□□□ 0.85
Cldn11Q60771 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cldn11Q60771 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cldn11Q60771 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn11Q60771 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn11Q60771 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.35■□□□□ 0.85
Cldn11Q60771 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn11Q60771 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.34■□□□□ 0.85
Cldn11Q60771 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn11Q60771 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn11Q60771 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.34■□□□□ 0.85
Cldn11Q60771 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn11Q60771 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.34■□□□□ 0.85
Cldn11Q60771 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn11Q60771 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cldn11Q60771 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn11Q60771 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn11Q60771 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.33■□□□□ 0.85
Cldn11Q60771 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Cldn11Q60771 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.33■□□□□ 0.84
Cldn11Q60771 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn11Q60771 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn11Q60771 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cldn11Q60771 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn11Q60771 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn11Q60771 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn11Q60771 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn11Q60771 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Cldn11Q60771 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cldn11Q60771 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.31■□□□□ 0.84
Cldn11Q60771 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn11Q60771 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn11Q60771 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn11Q60771 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cldn11Q60771 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.3■□□□□ 0.84
Cldn11Q60771 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn11Q60771 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.3■□□□□ 0.84
Cldn11Q60771 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.3■□□□□ 0.84
Cldn11Q60771 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms