Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Rnf20Q5DTM8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf20Q5DTM8 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf20Q5DTM8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf20Q5DTM8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf20Q5DTM8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf20Q5DTM8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf20Q5DTM8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.33■■□□□ 1.33
Rnf20Q5DTM8 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.33■■□□□ 1.33
Rnf20Q5DTM8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf20Q5DTM8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
Rnf20Q5DTM8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
Rnf20Q5DTM8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf20Q5DTM8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf20Q5DTM8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 AA386476-201ENSMUST00000098781 1665 ntBASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf20Q5DTM8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf20Q5DTM8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf20Q5DTM8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Rnf20Q5DTM8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.28■■□□□ 1.32
Rnf20Q5DTM8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rnf20Q5DTM8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
Rnf20Q5DTM8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf20Q5DTM8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf20Q5DTM8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Rnf20Q5DTM8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf20Q5DTM8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.27■■□□□ 1.32
Rnf20Q5DTM8 Gm21956-201ENSMUST00000179946 522 ntBASIC23.27■■□□□ 1.32
Rnf20Q5DTM8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf20Q5DTM8 Gm43137-201ENSMUST00000198052 594 ntBASIC23.27■■□□□ 1.32
Rnf20Q5DTM8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf20Q5DTM8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.31
Rnf20Q5DTM8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf20Q5DTM8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms