Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin28bQ45KJ6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lin28bQ45KJ6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Lin28bQ45KJ6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lin28bQ45KJ6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Lin28bQ45KJ6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin28bQ45KJ6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lin28bQ45KJ6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lin28bQ45KJ6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin28bQ45KJ6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Lin28bQ45KJ6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lin28bQ45KJ6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lin28bQ45KJ6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lin28bQ45KJ6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.66■□□□□ 0.58
Lin28bQ45KJ6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lin28bQ45KJ6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lin28bQ45KJ6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lin28bQ45KJ6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Reep4-203ENSMUST00000226563 1444 ntBASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lin28bQ45KJ6 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lin28bQ45KJ6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lin28bQ45KJ6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms