Protein–RNA interactions for Protein: Q3U4K9

Gm11110, Predicted gene 11110, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11110Q3U4K9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm11110Q3U4K9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm11110Q3U4K9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm11110Q3U4K9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm11110Q3U4K9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm11110Q3U4K9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm11110Q3U4K9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm11110Q3U4K9 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.77■□□□□ 0.28
Gm11110Q3U4K9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.77■□□□□ 0.27
Gm11110Q3U4K9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gm11110Q3U4K9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.77■□□□□ 0.27
Gm11110Q3U4K9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm11110Q3U4K9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Gm11110Q3U4K9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm11110Q3U4K9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Gm11110Q3U4K9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm11110Q3U4K9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm11110Q3U4K9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Gm9847-201ENSMUST00000052528 599 ntBASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm11110Q3U4K9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11110Q3U4K9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm11110Q3U4K9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11110Q3U4K9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11110Q3U4K9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11110Q3U4K9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11110Q3U4K9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm11110Q3U4K9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm11110Q3U4K9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm11110Q3U4K9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm11110Q3U4K9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm11110Q3U4K9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Gm11110Q3U4K9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms