Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IhhP97812 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.53■□□□□ 0.88
IhhP97812 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.53■□□□□ 0.88
IhhP97812 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
IhhP97812 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
IhhP97812 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IhhP97812 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IhhP97812 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
IhhP97812 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IhhP97812 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.52■□□□□ 0.88
IhhP97812 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
IhhP97812 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.52■□□□□ 0.88
IhhP97812 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IhhP97812 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IhhP97812 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
IhhP97812 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
IhhP97812 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
IhhP97812 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IhhP97812 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IhhP97812 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.51■□□□□ 0.87
IhhP97812 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.51■□□□□ 0.87
IhhP97812 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.51■□□□□ 0.87
IhhP97812 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
IhhP97812 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IhhP97812 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IhhP97812 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
IhhP97812 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
IhhP97812 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IhhP97812 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
IhhP97812 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.5■□□□□ 0.87
IhhP97812 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
IhhP97812 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IhhP97812 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
IhhP97812 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.49■□□□□ 0.87
IhhP97812 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IhhP97812 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
IhhP97812 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
IhhP97812 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
IhhP97812 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IhhP97812 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IhhP97812 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IhhP97812 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.48■□□□□ 0.87
IhhP97812 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
IhhP97812 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.48■□□□□ 0.87
IhhP97812 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
IhhP97812 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
IhhP97812 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.48■□□□□ 0.87
IhhP97812 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
IhhP97812 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
IhhP97812 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.48■□□□□ 0.87
IhhP97812 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.47■□□□□ 0.87
IhhP97812 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
IhhP97812 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.47■□□□□ 0.87
IhhP97812 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
IhhP97812 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
IhhP97812 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
IhhP97812 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.46■□□□□ 0.87
IhhP97812 Gm8495-201ENSMUST00000188740 694 ntBASIC20.46■□□□□ 0.87
IhhP97812 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
IhhP97812 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.46■□□□□ 0.87
IhhP97812 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
IhhP97812 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.45■□□□□ 0.86
IhhP97812 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
IhhP97812 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
IhhP97812 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
IhhP97812 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
IhhP97812 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
IhhP97812 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms