Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
H3f3aP84244 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
H3f3aP84244 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
H3f3aP84244 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.5■□□□□ 0.39
H3f3aP84244 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
H3f3aP84244 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
H3f3aP84244 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3f3aP84244 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
H3f3aP84244 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3aP84244 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
H3f3aP84244 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3aP84244 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.49■□□□□ 0.39
H3f3aP84244 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.49■□□□□ 0.39
H3f3aP84244 Gm8493-201ENSMUST00000196881 489 ntBASIC17.49■□□□□ 0.39
H3f3aP84244 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3aP84244 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H3f3aP84244 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
H3f3aP84244 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
H3f3aP84244 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
H3f3aP84244 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.49■□□□□ 0.39
H3f3aP84244 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
H3f3aP84244 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
H3f3aP84244 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3aP84244 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3aP84244 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
H3f3aP84244 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3aP84244 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3aP84244 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.48■□□□□ 0.39
H3f3aP84244 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
H3f3aP84244 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3aP84244 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3aP84244 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H3f3aP84244 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.48■□□□□ 0.39
H3f3aP84244 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
H3f3aP84244 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.47■□□□□ 0.39
H3f3aP84244 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
H3f3aP84244 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
H3f3aP84244 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
H3f3aP84244 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.46■□□□□ 0.39
H3f3aP84244 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.46■□□□□ 0.39
H3f3aP84244 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H3f3aP84244 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
H3f3aP84244 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
H3f3aP84244 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.45■□□□□ 0.38
H3f3aP84244 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
H3f3aP84244 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H3f3aP84244 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H3f3aP84244 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H3f3aP84244 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H3f3aP84244 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
H3f3aP84244 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H3f3aP84244 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.45■□□□□ 0.38
H3f3aP84244 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H3f3aP84244 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H3f3aP84244 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
H3f3aP84244 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H3f3aP84244 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.44■□□□□ 0.38
H3f3aP84244 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H3f3aP84244 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H3f3aP84244 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H3f3aP84244 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
H3f3aP84244 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H3f3aP84244 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
H3f3aP84244 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.43■□□□□ 0.38
H3f3aP84244 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms