Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lim2P56563 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lim2P56563 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lim2P56563 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lim2P56563 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.68■□□□□ 0.74
Lim2P56563 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lim2P56563 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.68■□□□□ 0.74
Lim2P56563 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lim2P56563 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Lim2P56563 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Lim2P56563 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.67■□□□□ 0.74
Lim2P56563 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Lim2P56563 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lim2P56563 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
Lim2P56563 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lim2P56563 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lim2P56563 Gm43173-201ENSMUST00000202246 593 ntBASIC19.66■□□□□ 0.74
Lim2P56563 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.66■□□□□ 0.74
Lim2P56563 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lim2P56563 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lim2P56563 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lim2P56563 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lim2P56563 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.65■□□□□ 0.74
Lim2P56563 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.65■□□□□ 0.74
Lim2P56563 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.65■□□□□ 0.74
Lim2P56563 Serp2-204ENSMUST00000228055 705 ntBASIC19.65■□□□□ 0.74
Lim2P56563 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lim2P56563 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lim2P56563 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Lim2P56563 Gm43017-201ENSMUST00000198296 752 ntBASIC19.64■□□□□ 0.73
Lim2P56563 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lim2P56563 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.64■□□□□ 0.73
Lim2P56563 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.64■□□□□ 0.73
Lim2P56563 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lim2P56563 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lim2P56563 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lim2P56563 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lim2P56563 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lim2P56563 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lim2P56563 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lim2P56563 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lim2P56563 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lim2P56563 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lim2P56563 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.63■□□□□ 0.73
Lim2P56563 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lim2P56563 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lim2P56563 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Lim2P56563 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.62■□□□□ 0.73
Lim2P56563 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lim2P56563 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lim2P56563 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.62■□□□□ 0.73
Lim2P56563 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lim2P56563 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lim2P56563 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lim2P56563 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lim2P56563 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lim2P56563 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lim2P56563 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.61■□□□□ 0.73
Lim2P56563 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Lim2P56563 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.61■□□□□ 0.73
Lim2P56563 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.61■□□□□ 0.73
Lim2P56563 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
Lim2P56563 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Lim2P56563 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.61■□□□□ 0.73
Lim2P56563 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lim2P56563 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.61■□□□□ 0.73
Lim2P56563 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms