Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.05■□□□□ 0.8
SftpbP50405 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SftpbP50405 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SftpbP50405 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SftpbP50405 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Gm5812-201ENSMUST00000061073 957 ntBASIC20.04■□□□□ 0.8
SftpbP50405 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SftpbP50405 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SftpbP50405 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SftpbP50405 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SftpbP50405 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SftpbP50405 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SftpbP50405 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.03■□□□□ 0.8
SftpbP50405 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SftpbP50405 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SftpbP50405 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SftpbP50405 Etf1-202ENSMUST00000180351 108 ntBASIC20.02■□□□□ 0.8
SftpbP50405 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.02■□□□□ 0.8
SftpbP50405 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SftpbP50405 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SftpbP50405 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SftpbP50405 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.02■□□□□ 0.8
SftpbP50405 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SftpbP50405 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SftpbP50405 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SftpbP50405 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SftpbP50405 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SftpbP50405 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SftpbP50405 Gm15546-201ENSMUST00000122095 826 ntBASIC20.01■□□□□ 0.79
SftpbP50405 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SftpbP50405 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SftpbP50405 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.01■□□□□ 0.79
SftpbP50405 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SftpbP50405 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SftpbP50405 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SftpbP50405 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20■□□□□ 0.79
SftpbP50405 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20■□□□□ 0.79
SftpbP50405 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20■□□□□ 0.79
SftpbP50405 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SftpbP50405 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SftpbP50405 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SftpbP50405 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SftpbP50405 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SftpbP50405 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SftpbP50405 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.99■□□□□ 0.79
SftpbP50405 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SftpbP50405 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SftpbP50405 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SftpbP50405 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SftpbP50405 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.98■□□□□ 0.79
SftpbP50405 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.98■□□□□ 0.79
SftpbP50405 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SftpbP50405 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SftpbP50405 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.98■□□□□ 0.79
SftpbP50405 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SftpbP50405 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SftpbP50405 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SftpbP50405 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SftpbP50405 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SftpbP50405 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SftpbP50405 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SftpbP50405 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SftpbP50405 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SftpbP50405 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SftpbP50405 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SftpbP50405 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SftpbP50405 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.96■□□□□ 0.79
SftpbP50405 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms