Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.48■■□□□ 1.03
HttP42859 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HttP42859 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HttP42859 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HttP42859 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HttP42859 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HttP42859 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
HttP42859 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HttP42859 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.47■■□□□ 1.03
HttP42859 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.47■■□□□ 1.03
HttP42859 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.47■■□□□ 1.03
HttP42859 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HttP42859 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HttP42859 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HttP42859 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HttP42859 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HttP42859 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HttP42859 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HttP42859 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HttP42859 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HttP42859 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.46■■□□□ 1.03
HttP42859 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HttP42859 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HttP42859 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HttP42859 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.45■■□□□ 1.02
HttP42859 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.45■■□□□ 1.02
HttP42859 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HttP42859 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.45■■□□□ 1.02
HttP42859 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HttP42859 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HttP42859 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HttP42859 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.44■■□□□ 1.02
HttP42859 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
HttP42859 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
HttP42859 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.44■■□□□ 1.02
HttP42859 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HttP42859 Gm37055-201ENSMUST00000191866 133 ntBASIC21.43■■□□□ 1.02
HttP42859 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HttP42859 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
HttP42859 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HttP42859 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HttP42859 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HttP42859 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.42■■□□□ 1.02
HttP42859 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HttP42859 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HttP42859 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HttP42859 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HttP42859 Gm38205-201ENSMUST00000192243 258 ntBASIC21.42■■□□□ 1.02
HttP42859 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.41■■□□□ 1.02
HttP42859 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HttP42859 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HttP42859 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.41■■□□□ 1.02
HttP42859 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.41■■□□□ 1.02
HttP42859 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HttP42859 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HttP42859 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HttP42859 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HttP42859 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HttP42859 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HttP42859 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HttP42859 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.4■■□□□ 1.02
HttP42859 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.4■■□□□ 1.02
HttP42859 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HttP42859 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HttP42859 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HttP42859 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.39■■□□□ 1.01
HttP42859 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.39■■□□□ 1.01
HttP42859 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HttP42859 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HttP42859 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.39■■□□□ 1.01
HttP42859 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HttP42859 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HttP42859 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HttP42859 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.38■■□□□ 1.01
HttP42859 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HttP42859 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
HttP42859 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HttP42859 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HttP42859 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HttP42859 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HttP42859 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HttP42859 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HttP42859 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.37■■□□□ 1.01
HttP42859 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HttP42859 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HttP42859 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms