Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nfkb1P25799 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nfkb1P25799 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Nfkb1P25799 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nfkb1P25799 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Nfkb1P25799 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.19■□□□□ 0.82
Nfkb1P25799 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Gm10849-201ENSMUST00000100397 618 ntBASIC20.19■□□□□ 0.82
Nfkb1P25799 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.19■□□□□ 0.82
Nfkb1P25799 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.19■□□□□ 0.82
Nfkb1P25799 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.19■□□□□ 0.82
Nfkb1P25799 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nfkb1P25799 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nfkb1P25799 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfkb1P25799 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfkb1P25799 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.18■□□□□ 0.82
Nfkb1P25799 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nfkb1P25799 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nfkb1P25799 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfkb1P25799 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nfkb1P25799 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nfkb1P25799 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nfkb1P25799 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfkb1P25799 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfkb1P25799 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfkb1P25799 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nfkb1P25799 Gm27405-201ENSMUST00000184201 112 ntBASIC20.17■□□□□ 0.82
Nfkb1P25799 Gm10033-202ENSMUST00000211874 928 ntBASIC20.17■□□□□ 0.82
Nfkb1P25799 Gm18671-201ENSMUST00000214826 683 ntBASIC20.17■□□□□ 0.82
Nfkb1P25799 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nfkb1P25799 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.17■□□□□ 0.82
Nfkb1P25799 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nfkb1P25799 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nfkb1P25799 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfkb1P25799 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfkb1P25799 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nfkb1P25799 Gm29257-201ENSMUST00000186115 639 ntBASIC20.16■□□□□ 0.82
Nfkb1P25799 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.16■□□□□ 0.82
Nfkb1P25799 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfkb1P25799 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfkb1P25799 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Nfkb1P25799 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfkb1P25799 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nfkb1P25799 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nfkb1P25799 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.15■□□□□ 0.82
Nfkb1P25799 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nfkb1P25799 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.15■□□□□ 0.82
Nfkb1P25799 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.15■□□□□ 0.82
Nfkb1P25799 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nfkb1P25799 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nfkb1P25799 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nfkb1P25799 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nfkb1P25799 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nfkb1P25799 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.14■□□□□ 0.81
Nfkb1P25799 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nfkb1P25799 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Nfkb1P25799 Gm42778-201ENSMUST00000199644 553 ntBASIC20.14■□□□□ 0.81
Nfkb1P25799 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nfkb1P25799 Gm9988-201ENSMUST00000069786 435 ntBASIC20.14■□□□□ 0.81
Nfkb1P25799 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nfkb1P25799 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nfkb1P25799 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nfkb1P25799 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nfkb1P25799 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nfkb1P25799 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nfkb1P25799 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.13■□□□□ 0.81
Nfkb1P25799 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nfkb1P25799 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.13■□□□□ 0.81
Nfkb1P25799 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nfkb1P25799 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.12■□□□□ 0.81
Nfkb1P25799 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.12■□□□□ 0.81
Nfkb1P25799 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nfkb1P25799 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nfkb1P25799 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Nfkb1P25799 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nfkb1P25799 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nfkb1P25799 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms