Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.84■□□□□ 0.61
Cntn1P12960 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.84■□□□□ 0.61
Cntn1P12960 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 Gm5874-201ENSMUST00000096101 508 ntBASIC18.84■□□□□ 0.61
Cntn1P12960 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cntn1P12960 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cntn1P12960 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cntn1P12960 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cntn1P12960 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cntn1P12960 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cntn1P12960 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.83■□□□□ 0.61
Cntn1P12960 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Cntn1P12960 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cntn1P12960 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cntn1P12960 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cntn1P12960 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cntn1P12960 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Cntn1P12960 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cntn1P12960 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cntn1P12960 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cntn1P12960 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cntn1P12960 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.82■□□□□ 0.6
Cntn1P12960 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cntn1P12960 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cntn1P12960 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cntn1P12960 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.81■□□□□ 0.6
Cntn1P12960 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cntn1P12960 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cntn1P12960 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cntn1P12960 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cntn1P12960 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.79■□□□□ 0.6
Cntn1P12960 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.79■□□□□ 0.6
Cntn1P12960 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cntn1P12960 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cntn1P12960 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.79■□□□□ 0.6
Cntn1P12960 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.78■□□□□ 0.6
Cntn1P12960 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cntn1P12960 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.78■□□□□ 0.6
Cntn1P12960 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cntn1P12960 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntn1P12960 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.77■□□□□ 0.6
Cntn1P12960 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cntn1P12960 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.77■□□□□ 0.6
Cntn1P12960 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cntn1P12960 Gm10493-201ENSMUST00000097270 612 ntBASIC18.77■□□□□ 0.6
Cntn1P12960 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cntn1P12960 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cntn1P12960 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cntn1P12960 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntn1P12960 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntn1P12960 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntn1P12960 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntn1P12960 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntn1P12960 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cntn1P12960 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cntn1P12960 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
Cntn1P12960 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms