Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdgfrbP05622 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdgfrbP05622 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PdgfrbP05622 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PdgfrbP05622 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PdgfrbP05622 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.84■□□□□ 0.77
PdgfrbP05622 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PdgfrbP05622 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PdgfrbP05622 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.84■□□□□ 0.77
PdgfrbP05622 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PdgfrbP05622 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.84■□□□□ 0.77
PdgfrbP05622 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
PdgfrbP05622 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PdgfrbP05622 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.83■□□□□ 0.77
PdgfrbP05622 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PdgfrbP05622 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PdgfrbP05622 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PdgfrbP05622 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PdgfrbP05622 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PdgfrbP05622 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PdgfrbP05622 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.83■□□□□ 0.77
PdgfrbP05622 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PdgfrbP05622 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PdgfrbP05622 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PdgfrbP05622 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PdgfrbP05622 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PdgfrbP05622 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PdgfrbP05622 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PdgfrbP05622 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PdgfrbP05622 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.82■□□□□ 0.76
PdgfrbP05622 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.82■□□□□ 0.76
PdgfrbP05622 Golph3-202ENSMUST00000226517 2359 ntBASIC19.81■□□□□ 0.76
PdgfrbP05622 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PdgfrbP05622 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PdgfrbP05622 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PdgfrbP05622 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PdgfrbP05622 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PdgfrbP05622 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PdgfrbP05622 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PdgfrbP05622 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PdgfrbP05622 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PdgfrbP05622 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.79■□□□□ 0.76
PdgfrbP05622 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PdgfrbP05622 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PdgfrbP05622 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
PdgfrbP05622 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PdgfrbP05622 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PdgfrbP05622 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.78■□□□□ 0.76
PdgfrbP05622 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PdgfrbP05622 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PdgfrbP05622 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
PdgfrbP05622 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PdgfrbP05622 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PdgfrbP05622 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PdgfrbP05622 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PdgfrbP05622 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
PdgfrbP05622 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PdgfrbP05622 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PdgfrbP05622 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.76■□□□□ 0.75
PdgfrbP05622 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PdgfrbP05622 Gm12251-201ENSMUST00000117893 792 ntBASIC19.76■□□□□ 0.75
PdgfrbP05622 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.76■□□□□ 0.75
PdgfrbP05622 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.76■□□□□ 0.75
PdgfrbP05622 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PdgfrbP05622 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PdgfrbP05622 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.76■□□□□ 0.75
PdgfrbP05622 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms