Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.17■□□□□ 0.34
P04224 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.17■□□□□ 0.34
P04224 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P04224 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.16■□□□□ 0.34
P04224 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.16■□□□□ 0.34
P04224 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P04224 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.15■□□□□ 0.34
P04224 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.15■□□□□ 0.34
P04224 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.15■□□□□ 0.34
P04224 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P04224 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
P04224 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
P04224 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
P04224 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.14■□□□□ 0.33
P04224 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
P04224 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.14■□□□□ 0.33
P04224 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
P04224 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
P04224 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
P04224 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.14■□□□□ 0.33
P04224 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P04224 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.13■□□□□ 0.33
P04224 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.13■□□□□ 0.33
P04224 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.13■□□□□ 0.33
P04224 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
P04224 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P04224 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.12■□□□□ 0.33
P04224 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Mir6538-201ENSMUST00000183713 110 ntBASIC17.12■□□□□ 0.33
P04224 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
P04224 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P04224 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04224 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.11■□□□□ 0.33
P04224 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.11■□□□□ 0.33
P04224 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P04224 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04224 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.11■□□□□ 0.33
P04224 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.11■□□□□ 0.33
P04224 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
P04224 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P04224 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms