Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.18■□□□□ 0.98
Vti1aO89116 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vti1aO89116 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Vti1aO89116 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.17■□□□□ 0.98
Vti1aO89116 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.17■□□□□ 0.98
Vti1aO89116 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vti1aO89116 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.16■□□□□ 0.98
Vti1aO89116 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.16■□□□□ 0.98
Vti1aO89116 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.16■□□□□ 0.98
Vti1aO89116 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.16■□□□□ 0.98
Vti1aO89116 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.16■□□□□ 0.98
Vti1aO89116 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vti1aO89116 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Vti1aO89116 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vti1aO89116 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.15■□□□□ 0.98
Vti1aO89116 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vti1aO89116 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vti1aO89116 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.14■□□□□ 0.97
Vti1aO89116 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.14■□□□□ 0.97
Vti1aO89116 Gm11421-201ENSMUST00000122124 294 ntBASIC21.14■□□□□ 0.97
Vti1aO89116 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vti1aO89116 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vti1aO89116 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vti1aO89116 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vti1aO89116 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vti1aO89116 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Vti1aO89116 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vti1aO89116 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vti1aO89116 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vti1aO89116 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.13■□□□□ 0.97
Vti1aO89116 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Vti1aO89116 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vti1aO89116 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vti1aO89116 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Vti1aO89116 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vti1aO89116 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vti1aO89116 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Vti1aO89116 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.12■□□□□ 0.97
Vti1aO89116 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vti1aO89116 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vti1aO89116 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vti1aO89116 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vti1aO89116 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vti1aO89116 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vti1aO89116 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vti1aO89116 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vti1aO89116 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Vti1aO89116 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.1■□□□□ 0.97
Vti1aO89116 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vti1aO89116 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vti1aO89116 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Vti1aO89116 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vti1aO89116 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Vti1aO89116 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vti1aO89116 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vti1aO89116 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vti1aO89116 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vti1aO89116 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vti1aO89116 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vti1aO89116 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vti1aO89116 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vti1aO89116 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vti1aO89116 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.08■□□□□ 0.96
Vti1aO89116 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vti1aO89116 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vti1aO89116 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vti1aO89116 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vti1aO89116 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vti1aO89116 Gm37179-201ENSMUST00000194862 823 ntBASIC21.07■□□□□ 0.96
Vti1aO89116 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.07■□□□□ 0.96
Vti1aO89116 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms