Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Gm10226O88253 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Gm8495-201ENSMUST00000188740 694 ntBASIC15.22■□□□□ 0.03
Gm10226O88253 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.22■□□□□ 0.03
Gm10226O88253 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.22■□□□□ 0.03
Gm10226O88253 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.22■□□□□ 0.03
Gm10226O88253 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm10226O88253 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm10226O88253 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10226O88253 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10226O88253 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10226O88253 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10226O88253 Gm27801-201ENSMUST00000184174 223 ntBASIC15.21■□□□□ 0.03
Gm10226O88253 Gm10493-201ENSMUST00000097270 612 ntBASIC15.21■□□□□ 0.03
Gm10226O88253 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10226O88253 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm10226O88253 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm10226O88253 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10226O88253 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10226O88253 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm10226O88253 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10226O88253 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10226O88253 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm10226O88253 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Gm10226O88253 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10226O88253 Gm5874-201ENSMUST00000096101 508 ntBASIC15.2■□□□□ 0.02
Gm10226O88253 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10226O88253 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm10226O88253 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.2■□□□□ 0.02
Gm10226O88253 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm10226O88253 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm10226O88253 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Gm10226O88253 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.19■□□□□ 0.02
Gm10226O88253 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm10226O88253 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm10226O88253 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.18■□□□□ 0.02
Gm10226O88253 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm10226O88253 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.18■□□□□ 0.02
Gm10226O88253 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.18■□□□□ 0.02
Gm10226O88253 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm10226O88253 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm10226O88253 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm10226O88253 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gm10226O88253 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gm10226O88253 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Gm10226O88253 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm10226O88253 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.16■□□□□ 0.02
Gm10226O88253 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Gm10226O88253 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm10226O88253 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10226O88253 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Gm10226O88253 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10226O88253 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10226O88253 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.15■□□□□ 0.02
Gm10226O88253 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.15■□□□□ 0.02
Gm10226O88253 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.15■□□□□ 0.02
Gm10226O88253 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm10226O88253 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms