Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Alx3O70137 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.76■□□□□ 0.43
Alx3O70137 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.76■□□□□ 0.43
Alx3O70137 Etf1-202ENSMUST00000180351 108 ntBASIC17.76■□□□□ 0.43
Alx3O70137 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.76■□□□□ 0.43
Alx3O70137 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.76■□□□□ 0.43
Alx3O70137 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Alx3O70137 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Alx3O70137 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.75■□□□□ 0.43
Alx3O70137 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Alx3O70137 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.75■□□□□ 0.43
Alx3O70137 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.75■□□□□ 0.43
Alx3O70137 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.75■□□□□ 0.43
Alx3O70137 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Alx3O70137 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Alx3O70137 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Alx3O70137 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Alx3O70137 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx3O70137 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Alx3O70137 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Alx3O70137 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx3O70137 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx3O70137 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Alx3O70137 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Alx3O70137 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alx3O70137 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alx3O70137 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Alx3O70137 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alx3O70137 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alx3O70137 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Alx3O70137 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Alx3O70137 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Alx3O70137 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alx3O70137 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alx3O70137 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Alx3O70137 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alx3O70137 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alx3O70137 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.72■□□□□ 0.43
Alx3O70137 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alx3O70137 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alx3O70137 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Alx3O70137 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Alx3O70137 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Alx3O70137 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.71■□□□□ 0.43
Alx3O70137 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Alx3O70137 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.71■□□□□ 0.43
Alx3O70137 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Alx3O70137 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.71■□□□□ 0.43
Alx3O70137 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Alx3O70137 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Alx3O70137 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Alx3O70137 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Alx3O70137 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Alx3O70137 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.7■□□□□ 0.42
Alx3O70137 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.7■□□□□ 0.42
Alx3O70137 Gm22238-201ENSMUST00000175222 88 ntBASIC17.7■□□□□ 0.42
Alx3O70137 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Gm9959-201ENSMUST00000068277 390 ntBASIC17.7■□□□□ 0.42
Alx3O70137 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.7■□□□□ 0.42
Alx3O70137 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Alx3O70137 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.7■□□□□ 0.42
Alx3O70137 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx3O70137 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx3O70137 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Alx3O70137 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Alx3O70137 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Alx3O70137 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms