Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SncaO55042 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SncaO55042 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SncaO55042 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SncaO55042 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SncaO55042 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SncaO55042 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SncaO55042 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.21■□□□□ 0.19
SncaO55042 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.21■□□□□ 0.19
SncaO55042 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SncaO55042 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SncaO55042 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SncaO55042 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SncaO55042 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SncaO55042 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SncaO55042 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SncaO55042 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SncaO55042 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SncaO55042 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SncaO55042 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SncaO55042 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SncaO55042 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SncaO55042 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.2■□□□□ 0.18
SncaO55042 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.2■□□□□ 0.18
SncaO55042 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SncaO55042 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SncaO55042 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.19■□□□□ 0.18
SncaO55042 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.19■□□□□ 0.18
SncaO55042 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.19■□□□□ 0.18
SncaO55042 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SncaO55042 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SncaO55042 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.18■□□□□ 0.18
SncaO55042 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.18■□□□□ 0.18
SncaO55042 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.18■□□□□ 0.18
SncaO55042 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.18■□□□□ 0.18
SncaO55042 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SncaO55042 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SncaO55042 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.17■□□□□ 0.18
SncaO55042 Mir6236-201ENSMUST00000184437 123 ntBASIC16.17■□□□□ 0.18
SncaO55042 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SncaO55042 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SncaO55042 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.16■□□□□ 0.18
SncaO55042 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SncaO55042 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SncaO55042 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms