Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.47■□□□□ 0.87
Cldn5O54942 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Cldn5O54942 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.47■□□□□ 0.87
Cldn5O54942 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn5O54942 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn5O54942 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn5O54942 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Cldn5O54942 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn5O54942 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cldn5O54942 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.46■□□□□ 0.87
Cldn5O54942 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn5O54942 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn5O54942 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn5O54942 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
Cldn5O54942 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn5O54942 Gm10493-201ENSMUST00000097270 612 ntBASIC20.45■□□□□ 0.86
Cldn5O54942 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cldn5O54942 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn5O54942 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cldn5O54942 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.44■□□□□ 0.86
Cldn5O54942 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn5O54942 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Cldn5O54942 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Cldn5O54942 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.43■□□□□ 0.86
Cldn5O54942 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Cldn5O54942 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.43■□□□□ 0.86
Cldn5O54942 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn5O54942 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn5O54942 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn5O54942 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn5O54942 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cldn5O54942 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn5O54942 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn5O54942 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn5O54942 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn5O54942 AA386476-201ENSMUST00000098781 1665 ntBASIC20.42■□□□□ 0.86
Cldn5O54942 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.41■□□□□ 0.86
Cldn5O54942 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Cldn5O54942 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.41■□□□□ 0.86
Cldn5O54942 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.41■□□□□ 0.86
Cldn5O54942 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.41■□□□□ 0.86
Cldn5O54942 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.41■□□□□ 0.86
Cldn5O54942 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn5O54942 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn5O54942 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn5O54942 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cldn5O54942 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.4■□□□□ 0.86
Cldn5O54942 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.4■□□□□ 0.86
Cldn5O54942 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn5O54942 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn5O54942 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cldn5O54942 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cldn5O54942 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn5O54942 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn5O54942 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn5O54942 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Cldn5O54942 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn5O54942 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Cldn5O54942 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn5O54942 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Cldn5O54942 Gm26571-201ENSMUST00000181399 666 ntBASIC20.39■□□□□ 0.85
Cldn5O54942 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn5O54942 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn5O54942 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn5O54942 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn5O54942 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.38■□□□□ 0.85
Cldn5O54942 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms