Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.16■□□□□ 0.66
Npc1O35604 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.16■□□□□ 0.66
Npc1O35604 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Npc1O35604 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.16■□□□□ 0.66
Npc1O35604 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Npc1O35604 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Npc1O35604 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1O35604 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1O35604 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1O35604 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Npc1O35604 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1O35604 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.15■□□□□ 0.66
Npc1O35604 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1O35604 Golph3-202ENSMUST00000226517 2359 ntBASIC19.15■□□□□ 0.66
Npc1O35604 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1O35604 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Npc1O35604 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.15■□□□□ 0.66
Npc1O35604 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.14■□□□□ 0.65
Npc1O35604 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.14■□□□□ 0.65
Npc1O35604 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Npc1O35604 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.14■□□□□ 0.65
Npc1O35604 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1O35604 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.14■□□□□ 0.65
Npc1O35604 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Npc1O35604 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Npc1O35604 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Npc1O35604 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Npc1O35604 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Npc1O35604 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1O35604 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1O35604 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.13■□□□□ 0.65
Npc1O35604 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1O35604 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1O35604 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Npc1O35604 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Npc1O35604 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1O35604 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.12■□□□□ 0.65
Npc1O35604 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1O35604 Gm26833-201ENSMUST00000180899 440 ntBASIC19.12■□□□□ 0.65
Npc1O35604 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1O35604 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Npc1O35604 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.11■□□□□ 0.65
Npc1O35604 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Npc1O35604 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Npc1O35604 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Npc1O35604 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Npc1O35604 Iqck-206ENSMUST00000208658 2891 ntBASIC19.11■□□□□ 0.65
Npc1O35604 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Npc1O35604 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1O35604 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Npc1O35604 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.1■□□□□ 0.65
Npc1O35604 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Npc1O35604 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Npc1O35604 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.09■□□□□ 0.65
Npc1O35604 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.09■□□□□ 0.65
Npc1O35604 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Npc1O35604 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Npc1O35604 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1O35604 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Npc1O35604 Smad6-203ENSMUST00000179458 273 ntBASIC19.08■□□□□ 0.64
Npc1O35604 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.08■□□□□ 0.64
Npc1O35604 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Npc1O35604 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Npc1O35604 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Npc1O35604 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Npc1O35604 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Npc1O35604 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Npc1O35604 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1O35604 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Npc1O35604 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1O35604 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.07■□□□□ 0.64
Npc1O35604 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1O35604 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Npc1O35604 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Npc1O35604 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms