Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Raet1bO08603 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.38■□□□□ 0.37
Raet1bO08603 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Gm13241-201ENSMUST00000094493 780 ntBASIC17.38■□□□□ 0.37
Raet1bO08603 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Raet1bO08603 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.38■□□□□ 0.37
Raet1bO08603 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Raet1bO08603 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1bO08603 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Raet1bO08603 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1bO08603 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.37■□□□□ 0.37
Raet1bO08603 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1bO08603 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.37■□□□□ 0.37
Raet1bO08603 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.37■□□□□ 0.37
Raet1bO08603 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1bO08603 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1bO08603 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Raet1bO08603 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.36■□□□□ 0.37
Raet1bO08603 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 Gm21956-201ENSMUST00000179946 522 ntBASIC17.36■□□□□ 0.37
Raet1bO08603 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Raet1bO08603 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.36■□□□□ 0.37
Raet1bO08603 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Raet1bO08603 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.36■□□□□ 0.37
Raet1bO08603 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1bO08603 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Raet1bO08603 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Raet1bO08603 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1bO08603 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Raet1bO08603 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Raet1bO08603 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1bO08603 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1bO08603 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Raet1bO08603 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Raet1bO08603 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Raet1bO08603 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1bO08603 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1bO08603 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1bO08603 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1bO08603 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1bO08603 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.34■□□□□ 0.37
Raet1bO08603 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Raet1bO08603 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.34■□□□□ 0.37
Raet1bO08603 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Raet1bO08603 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.34■□□□□ 0.37
Raet1bO08603 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1bO08603 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Raet1bO08603 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1bO08603 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1bO08603 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Raet1bO08603 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Raet1bO08603 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1bO08603 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.33■□□□□ 0.36
Raet1bO08603 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Raet1bO08603 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.33■□□□□ 0.36
Raet1bO08603 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Raet1bO08603 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1bO08603 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Raet1bO08603 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 AA386476-201ENSMUST00000098781 1665 ntBASIC17.32■□□□□ 0.36
Raet1bO08603 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Raet1bO08603 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Raet1bO08603 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Raet1bO08603 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.32■□□□□ 0.36
Raet1bO08603 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 Gm43137-201ENSMUST00000198052 594 ntBASIC17.32■□□□□ 0.36
Raet1bO08603 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Raet1bO08603 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Raet1bO08603 Golph3-202ENSMUST00000226517 2359 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms