Protein–RNA interactions for Protein: J3KMS0

Gm21411, Predicted gene, 21411, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21411J3KMS0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21411J3KMS0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21411J3KMS0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Gm21956-201ENSMUST00000179946 522 ntBASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21411J3KMS0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21411J3KMS0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21411J3KMS0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21411J3KMS0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
Gm21411J3KMS0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21411J3KMS0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm21411J3KMS0 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.58■□□□□ 0.41
Gm21411J3KMS0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21411J3KMS0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21411J3KMS0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21411J3KMS0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21411J3KMS0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21411J3KMS0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21411J3KMS0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21411J3KMS0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gm21411J3KMS0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm21411J3KMS0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm21411J3KMS0 Gm43137-201ENSMUST00000198052 594 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms