Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 AC154266.1-201ENSMUST00000223190 503 ntBASIC30.29■■■□□ 2.44
Pcf11G3X9Z4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pcf11G3X9Z4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pcf11G3X9Z4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Pcf11G3X9Z4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Pcf11G3X9Z4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Gm13148-201ENSMUST00000118892 745 ntBASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcf11G3X9Z4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
Pcf11G3X9Z4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pcf11G3X9Z4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pcf11G3X9Z4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pcf11G3X9Z4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
Pcf11G3X9Z4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Pcf11G3X9Z4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pcf11G3X9Z4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC30.25■■■□□ 2.43
Pcf11G3X9Z4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pcf11G3X9Z4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pcf11G3X9Z4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pcf11G3X9Z4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC30.25■■■□□ 2.43
Pcf11G3X9Z4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC30.24■■■□□ 2.43
Pcf11G3X9Z4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC30.24■■■□□ 2.43
Pcf11G3X9Z4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pcf11G3X9Z4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC30.24■■■□□ 2.43
Pcf11G3X9Z4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Pcf11G3X9Z4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcf11G3X9Z4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 AC112142.1-201ENSMUST00000228796 918 ntBASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcf11G3X9Z4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pcf11G3X9Z4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pcf11G3X9Z4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pcf11G3X9Z4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Pcf11G3X9Z4 Spcs1-207ENSMUST00000228767 1008 ntBASIC30.2■■■□□ 2.43
Pcf11G3X9Z4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Pcf11G3X9Z4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pcf11G3X9Z4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC30.2■■■□□ 2.42
Pcf11G3X9Z4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pcf11G3X9Z4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Pcf11G3X9Z4 Gm13042-201ENSMUST00000119244 1955 ntBASIC30.19■■■□□ 2.42
Pcf11G3X9Z4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC30.19■■■□□ 2.42
Pcf11G3X9Z4 AA386476-201ENSMUST00000098781 1665 ntBASIC30.19■■■□□ 2.42
Pcf11G3X9Z4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pcf11G3X9Z4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC30.19■■■□□ 2.42
Pcf11G3X9Z4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC30.19■■■□□ 2.42
Pcf11G3X9Z4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pcf11G3X9Z4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Pcf11G3X9Z4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Pcf11G3X9Z4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Pcf11G3X9Z4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Pcf11G3X9Z4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Pcf11G3X9Z4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
Pcf11G3X9Z4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Pcf11G3X9Z4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC30.16■■■□□ 2.42
Pcf11G3X9Z4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Gm43859-201ENSMUST00000200075 1412 ntBASIC30.15■■■□□ 2.42
Pcf11G3X9Z4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms