Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc188F6WEU2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc188F6WEU2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc188F6WEU2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc188F6WEU2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc188F6WEU2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc188F6WEU2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc188F6WEU2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc188F6WEU2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc188F6WEU2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Mir6236-201ENSMUST00000184437 123 ntBASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc188F6WEU2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Gm43799-201ENSMUST00000201845 579 ntBASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc188F6WEU2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc188F6WEU2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Gm11249-201ENSMUST00000117071 859 ntBASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Gm6433-201ENSMUST00000118634 875 ntBASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc188F6WEU2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccdc188F6WEU2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Mir1199-201ENSMUST00000117015 119 ntBASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc188F6WEU2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 155.9 ms