Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav19A0A0B4J1K4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Gm7143-201ENSMUST00000222811 859 ntBASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Trav19A0A0B4J1K4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav19A0A0B4J1K4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav19A0A0B4J1K4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav19A0A0B4J1K4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav19A0A0B4J1K4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Mir6236-201ENSMUST00000184437 123 ntBASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav19A0A0B4J1K4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav19A0A0B4J1K4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms