Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.43■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.4■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trbv12-1A0A0B4J1H0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm11421-201ENSMUST00000122124 294 ntBASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm43017-201ENSMUST00000198296 752 ntBASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.36■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm26833-201ENSMUST00000180899 440 ntBASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv12-1A0A0B4J1H0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv12-1A0A0B4J1H0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.34■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.33■□□□□ 0.37
Trbv12-1A0A0B4J1H0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms