Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv21A0A0A6YX06 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Trbv21A0A0A6YX06 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv21A0A0A6YX06 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv21A0A0A6YX06 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv21A0A0A6YX06 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv21A0A0A6YX06 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv21A0A0A6YX06 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.18■□□□□ 0.5
Trbv21A0A0A6YX06 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv21A0A0A6YX06 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.18■□□□□ 0.5
Trbv21A0A0A6YX06 Gm13241-201ENSMUST00000094493 780 ntBASIC18.18■□□□□ 0.5
Trbv21A0A0A6YX06 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trbv21A0A0A6YX06 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv21A0A0A6YX06 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trbv21A0A0A6YX06 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv21A0A0A6YX06 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv21A0A0A6YX06 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv21A0A0A6YX06 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv21A0A0A6YX06 Gm21956-201ENSMUST00000179946 522 ntBASIC18.15■□□□□ 0.5
Trbv21A0A0A6YX06 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv21A0A0A6YX06 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv21A0A0A6YX06 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Trbv21A0A0A6YX06 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv21A0A0A6YX06 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Serp2-204ENSMUST00000228055 705 ntBASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.13■□□□□ 0.49
Trbv21A0A0A6YX06 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv21A0A0A6YX06 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms