Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4-2A0A075B638 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4-2A0A075B638 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav4-2A0A075B638 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-2A0A075B638 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-2A0A075B638 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-2A0A075B638 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-2A0A075B638 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-2A0A075B638 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav4-2A0A075B638 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trav4-2A0A075B638 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Mir6236-201ENSMUST00000184437 123 ntBASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav4-2A0A075B638 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav4-2A0A075B638 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 BC021767-201ENSMUST00000126387 1716 ntBASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Gm7143-201ENSMUST00000222811 859 ntBASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav4-2A0A075B638 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav4-2A0A075B638 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav4-2A0A075B638 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms