Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5-1A0A075B5Z7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5-1A0A075B5Z7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Gm27801-201ENSMUST00000184174 223 ntBASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Gm5874-201ENSMUST00000096101 508 ntBASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Gm10493-201ENSMUST00000097270 612 ntBASIC16.89■□□□□ 0.29
Trav5-1A0A075B5Z7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav5-1A0A075B5Z7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 AA386476-201ENSMUST00000098781 1665 ntBASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-1A0A075B5Z7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-1A0A075B5Z7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-1A0A075B5Z7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-1A0A075B5Z7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav5-1A0A075B5Z7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms