Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv4A0A075B5I2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv4A0A075B5I2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv4A0A075B5I2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trbv4A0A075B5I2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv4A0A075B5I2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv4A0A075B5I2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv4A0A075B5I2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trbv4A0A075B5I2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv4A0A075B5I2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv4A0A075B5I2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv4A0A075B5I2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv4A0A075B5I2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv4A0A075B5I2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv4A0A075B5I2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv4A0A075B5I2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Trbv4A0A075B5I2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.71■□□□□ 0.74
Trbv4A0A075B5I2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv4A0A075B5I2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv4A0A075B5I2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trbv4A0A075B5I2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv4A0A075B5I2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv4A0A075B5I2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv4A0A075B5I2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv4A0A075B5I2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv4A0A075B5I2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv4A0A075B5I2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Gm21956-201ENSMUST00000179946 522 ntBASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trbv4A0A075B5I2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv4A0A075B5I2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv4A0A075B5I2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv4A0A075B5I2 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.65■□□□□ 0.74
Trbv4A0A075B5I2 Gm13241-201ENSMUST00000094493 780 ntBASIC19.65■□□□□ 0.74
Trbv4A0A075B5I2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trbv4A0A075B5I2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.65■□□□□ 0.74
Trbv4A0A075B5I2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 195.9 ms