Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Btnl6-201ENSMUST00000075483 1620 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm38056-201ENSMUST00000193928 5027 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm9062-201ENSMUST00000117712 727 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm7857-201ENSMUST00000117957 358 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm12176-201ENSMUST00000121420 875 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm5266-201ENSMUST00000187302 1162 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm8625-201ENSMUST00000194185 1077 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm7207-201ENSMUST00000211575 1067 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm5905-201ENSMUST00000211731 580 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm9176-201ENSMUST00000219955 1120 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 CT009757.1-201ENSMUST00000222801 738 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 CT009527.1-201ENSMUST00000224205 339 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Fgd3-202ENSMUST00000110086 2628 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Gm35048-201ENSMUST00000192105 2802 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC8.19□□□□□ -1.1
Hmgb3O54879 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 AC117245.4-202ENSMUST00000214403 3816 ntTSL 5 BASIC8.19□□□□□ -1.1
Hmgb3O54879 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Pan2-201ENSMUST00000005825 4445 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Ankdd1b-201ENSMUST00000055607 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Prokr1-201ENSMUST00000050887 4075 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Hmgb3O54879 Lrtm2-202ENSMUST00000112756 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Pfkp-207ENSMUST00000138703 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm42735-201ENSMUST00000201718 1646 ntBASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Kif28-203ENSMUST00000221136 3538 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Apex2-203ENSMUST00000112720 4742 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm13045-201ENSMUST00000119019 712 ntBASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm15432-201ENSMUST00000121106 195 ntBASIC8.18□□□□□ -1.1
Hmgb3O54879 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 Mir6546-201ENSMUST00000184460 62 ntBASIC8.18□□□□□ -1.1
Hmgb3O54879 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm45349-201ENSMUST00000210285 1074 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Gm45308-201ENSMUST00000210610 415 ntBASIC8.18□□□□□ -1.1
Hmgb3O54879 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Hmgb3O54879 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC8.18□□□□□ -1.1
Hmgb3O54879 Lgi3-203ENSMUST00000226548 1001 ntBASIC8.18□□□□□ -1.1
Hmgb3O54879 AC171241.1-201ENSMUST00000228144 1166 ntBASIC8.18□□□□□ -1.1
Hmgb3O54879 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms