Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Prss23os-202ENSMUST00000179361 1362 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm5472-201ENSMUST00000178604 1678 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 AC154640.1-203ENSMUST00000228316 1618 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm11979-201ENSMUST00000119629 743 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm6881-201ENSMUST00000121811 833 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm8451-201ENSMUST00000170338 447 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm27956-201ENSMUST00000175604 260 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm6686-201ENSMUST00000178455 258 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm9619-201ENSMUST00000211587 762 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm5905-201ENSMUST00000211731 580 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm18001-201ENSMUST00000212023 688 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 AC114573.1-201ENSMUST00000224120 1210 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 AC134860.5-201ENSMUST00000225071 1249 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 CT025689.1-201ENSMUST00000225214 283 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 AC149294.3-201ENSMUST00000226888 732 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm5453-201ENSMUST00000080866 447 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm42970-201ENSMUST00000196407 1352 ntBASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Sec61a2Q9JLR1 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm11470-201ENSMUST00000118868 1475 ntBASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Sec61a2Q9JLR1 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms