Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm4862-201ENSMUST00000170405 438 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm7928-201ENSMUST00000181249 701 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm45085-201ENSMUST00000209100 441 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm9791-201ENSMUST00000060997 447 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 n-R5s71-201ENSMUST00000093668 119 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm43737-201ENSMUST00000199915 2740 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Jam2-202ENSMUST00000114195 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm26903-201ENSMUST00000180749 4583 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Sec61a2Q9JLR1 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Mir1249-201ENSMUST00000116791 98 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm6500-201ENSMUST00000119412 451 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm11736-201ENSMUST00000121468 505 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm15982-201ENSMUST00000121681 554 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm25951-201ENSMUST00000175330 64 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm18010-201ENSMUST00000203553 202 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Gm8557-201ENSMUST00000220777 475 ntBASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Sec61a2Q9JLR1 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms