Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm36955-201ENSMUST00000194316 1661 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Osbpl3-203ENSMUST00000114466 2916 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Ssb-201ENSMUST00000090852 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm11203-201ENSMUST00000122169 741 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm20540-201ENSMUST00000172972 799 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm24325-201ENSMUST00000175344 74 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm4307-201ENSMUST00000177945 910 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Aamdc-214ENSMUST00000178078 723 ntTSL 2 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Mir6922-201ENSMUST00000185099 66 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm8976-201ENSMUST00000187136 703 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm2693-201ENSMUST00000189119 571 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm7893-201ENSMUST00000189666 225 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm37506-201ENSMUST00000192008 143 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm36976-201ENSMUST00000192632 1110 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm45134-201ENSMUST00000206046 1189 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm4303-201ENSMUST00000218922 910 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm4305-201ENSMUST00000219159 910 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm8257-201ENSMUST00000111860 1590 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm3286-201ENSMUST00000171752 1316 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh15Q99PJ1 Mfap5-207ENSMUST00000148517 1506 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Sncaip-210ENSMUST00000179689 1512 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Rps8-ps2-201ENSMUST00000118709 624 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm8814-201ENSMUST00000119072 535 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm14438-201ENSMUST00000121572 624 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm12121-201ENSMUST00000131630 500 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm22906-201ENSMUST00000175191 250 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm9637-201ENSMUST00000179141 873 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Olfr1425-201ENSMUST00000087828 939 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Olfr1222-201ENSMUST00000099794 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Kif16b-203ENSMUST00000211861 4523 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gfpt1-201ENSMUST00000032057 2286 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 AC125223.2-202ENSMUST00000225020 4103 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm43847-201ENSMUST00000200070 1940 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Rabep1-206ENSMUST00000177731 3167 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Stat1-203ENSMUST00000186057 3998 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Trav9-1-201ENSMUST00000103581 398 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Trav9-4-201ENSMUST00000103662 395 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm8261-201ENSMUST00000119275 1208 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm6285-201ENSMUST00000122012 498 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Trav9d-1-201ENSMUST00000178426 337 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm7836-201ENSMUST00000209730 432 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 AC160991.2-201ENSMUST00000223784 1135 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Gskip-201ENSMUST00000051934 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh15Q99PJ1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdh15Q99PJ1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh15Q99PJ1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh15Q99PJ1 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdh15Q99PJ1 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms