Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm15285-201ENSMUST00000119271 473 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm5259-201ENSMUST00000191231 800 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm38153-201ENSMUST00000195484 472 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm5194-201ENSMUST00000221457 742 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 AC154766.1-201ENSMUST00000226550 936 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 AC122459.4-201ENSMUST00000228654 551 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm44907-201ENSMUST00000207423 1633 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Vash2-202ENSMUST00000166139 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Cyld-210ENSMUST00000211554 4638 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nod1Q8BHB0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm25723-201ENSMUST00000104530 126 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm12700-201ENSMUST00000118145 457 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm13975-201ENSMUST00000119253 782 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm14834-201ENSMUST00000119416 795 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm10045-201ENSMUST00000178657 483 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm18299-201ENSMUST00000192026 636 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm37819-201ENSMUST00000194626 1065 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm36980-201ENSMUST00000195643 622 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm5905-201ENSMUST00000211731 580 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm5310-201ENSMUST00000197861 1511 ntBASIC10.67□□□□□ -0.7
Nod1Q8BHB0 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Krba1-208ENSMUST00000203371 4000 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nod1Q8BHB0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Gm42879-201ENSMUST00000198656 2214 ntBASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Gm8754-201ENSMUST00000118391 520 ntBASIC10.66□□□□□ -0.7
Nod1Q8BHB0 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms